Awesome-Bioinformatics

A curated list of awesome Bioinformatics libraries and software.

3193

8 months ago

awesomeawesome-listbioinformatics

bioinformatics

bioinformatics

:microscope: Path to a free self-taught education in Bioinformatics!

5518

8 months ago

DeepPurpose

DeepPurpose

A Deep Learning Toolkit for DTI, Drug Property, PPI, DDI, Protein Function Predi

Jupyter Notebook975bsd-3-clause

5 months ago

bioinformaticscovid19ddi

transformerCPI

transformerCPI

TransformerCPI: Improving compound–protein interaction prediction by sequence-ba

Python135apache-2.0

2 years ago

compound-protein-interactiondrug-discoverydrug-target-identification

biobert

Bioinformatics'2020: BioBERT: a pre-trained biomedical language representation m

Python1958other

last year

biohacker

A nodeschool workshop that gives some usage examples of bionode for bioinformati

JavaScript5

6 years ago

bioinformaticsbionodedocker

oneliners

Useful bash one-liners for bioinformatics.

1823

last year

biocaml

OCaml Bioinformatics Library

OCaml123other

2 years ago

bionode

bionode

Modular and universal bioinformatics

JavaScript312mit

5 years ago

bioinformaticsbionodemetapackage

bioscala

Bioinformatics for the Scala programming language

Scala109other

9 months ago

pybedtools

Python wrapper -- and more -- for BEDTools (bioinformatics tools for "genome ari

Python310other

18 days ago

MultiQC

MultiQC

Aggregate results from bioinformatics analyses across many samples into a single

JavaScript1229gpl-3.0

3 days ago

analysisbiocondabioinformatics

dna-transcription-kata

dna-transcription-kata

Bioinformatics-themed kata for practicing string manipulation in a data transfor

9mit

2 years ago

bioinformaticsbiologychallenge

rust-bio

rust-bio

This library provides implementations of many algorithms and data structures tha

Rust1546mit

5 months ago

zsh-completions-bio

zsh-completions-bio

Missing zsh shell completion scripts for bioinformatics tools

Python9mit

25 days ago

r-peridot

Software for intuitively doing Differential Gene Expression (DGE) analysis on Wi

Java4other

5 years ago

bioconductorbioinformaticsbioinformatics-analysis

dicoogle

dicoogle

Dicoogle - Open Source PACS

Java450gpl-3.0

10 days ago

dicomdicom-standarddicoogle

Awesome-Bioinformatics

A curated list of awesome Bioinformatics libraries and software.

3193

8 months ago

awesomeawesome-listbioinformatics

bioinformatics

bioinformatics

:microscope: Path to a free self-taught education in Bioinformatics!

5518

8 months ago

DeepPurpose

DeepPurpose

A Deep Learning Toolkit for DTI, Drug Property, PPI, DDI, Protein Function Predi

Jupyter Notebook975bsd-3-clause

5 months ago

bioinformaticscovid19ddi

transformerCPI

transformerCPI

TransformerCPI: Improving compound–protein interaction prediction by sequence-ba

Python135apache-2.0

2 years ago

compound-protein-interactiondrug-discoverydrug-target-identification

biobert

Bioinformatics'2020: BioBERT: a pre-trained biomedical language representation m

Python1958other

last year

biohacker

A nodeschool workshop that gives some usage examples of bionode for bioinformati

JavaScript5

6 years ago

bioinformaticsbionodedocker

oneliners

Useful bash one-liners for bioinformatics.

1823

last year

biocaml

OCaml Bioinformatics Library

OCaml123other

2 years ago

bionode

bionode

Modular and universal bioinformatics

JavaScript312mit

5 years ago

bioinformaticsbionodemetapackage

bioscala

Bioinformatics for the Scala programming language

Scala109other

9 months ago

pybedtools

Python wrapper -- and more -- for BEDTools (bioinformatics tools for "genome ari

Python310other

18 days ago

MultiQC

MultiQC

Aggregate results from bioinformatics analyses across many samples into a single

JavaScript1229gpl-3.0

3 days ago

analysisbiocondabioinformatics

dna-transcription-kata

dna-transcription-kata

Bioinformatics-themed kata for practicing string manipulation in a data transfor

9mit

2 years ago

bioinformaticsbiologychallenge

rust-bio

rust-bio

This library provides implementations of many algorithms and data structures tha

Rust1546mit

5 months ago

zsh-completions-bio

zsh-completions-bio

Missing zsh shell completion scripts for bioinformatics tools

Python9mit

25 days ago

bpipe

Bpipe - a tool for running and managing bioinformatics pipelines

Groovy226other

5 months ago

r-peridot

Software for intuitively doing Differential Gene Expression (DGE) analysis on Wi

Java4other

5 years ago

bioconductorbioinformaticsbioinformatics-analysis

dicoogle

dicoogle

Dicoogle - Open Source PACS

Java450gpl-3.0

10 days ago

dicomdicom-standarddicoogle