OME (Open Microscopy Environment) develops open-source software and data format standards for the storage and manipulation of biological light microscopy data. A joint project between universities, research establishments and industry in Europe and the USA, OME has over 20 active researchers with strong links to the microscopy community. Funded by private and public research grants, OME has been a major force on the international microscopy stage since 2000.

GNU General Public License v2.0

openmicroscopy

Interoperable web-based slide microscopy viewer and annotation tool

Apache License 2.0

slim

Identify nuclei in a microscopy image and assign each pixel of the image to a particular nucleus

openmicroscopy

slim

MAX-Nucleus-Segmenter