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cyvcf

A fast Python library for VCF files leveraging Cython for speed.

Python52mit

7 years ago

cyvcf2

cython + htslib == fast VCF and BCF processing

Cython381mit

2 months ago

bioinformaticscythongenomics

vcfanno

annotate a VCF with other VCFs/BEDs/tabixed files

Go366mit

12 months ago

annotationbioinformaticsgenomics

genozip

A modern compressor for genomic files (FASTQ, SAM/BAM/CRAM, VCF, FASTA, GFF/GTF/

C159other

last month

23andmebambgzip

vcftools

A set of tools written in Perl and C++ for working with VCF files, such as those

C++504lgpl-3.0

last year

pysam

Pysam is a Python package for reading, manipulating, and writing genomics data s

Cython785mit

23 days ago

bioinformaticshtslibngs

vcflib

C++ library and cmdline tools for parsing and manipulating VCF files with pytho

C++621mit

15 hours ago

genomicsgenotypinghaplotypecaller