mosdepth
fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing
Nim702mit
3 months ago
coveragedepthexome
genozip
A modern compressor for genomic files (FASTQ, SAM/BAM/CRAM, VCF, FASTA, GFF/GTF/
C159other
last month
23andmebambgzip
pysam
Pysam is a Python package for reading, manipulating, and writing genomics data s
Cython785mit
22 days ago
bioinformaticshtslibngs
somalier
fast sample-swap and relatedness checks on BAMs/CRAMs/VCFs/GVCFs... "like damn t
Nim270mit
10 months ago
bioinformaticscancer-genomicsgenomics