mosdepth

fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing

License

MIT License

fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing

Creator

brentp

Related apps

cruzdb

python access to UCSC genomes database

Python135mit

4 years ago

cyvcf2

cython + htslib == fast VCF and BCF processing

Cython383mit

3 months ago

bioinformaticscythongenomics

gsort

sort genomic data

Go35mit

5 years ago

smoove

structural variant calling and genotyping with existing tools, but, smoothly.

Go239apache-2.0

6 months ago

genomicslumpystructural-variation

somalier

somalier

fast sample-swap and relatedness checks on BAMs/CRAMs/VCFs/GVCFs... "like damn t

Nim272mit

11 months ago

bioinformaticscancer-genomicsgenomics

vcfanno

vcfanno

annotate a VCF with other VCFs/BEDs/tabixed files

Go367mit

last year

annotationbioinformaticsgenomics