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Go35mit

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A modern compressor for genomic files (FASTQ, SAM/BAM/CRAM, VCF, FASTA, GFF/GTF/

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HTML5 canvas genomic graphics library

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Python135mit

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Interactive web-based genome browser.

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Perl47other

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The Leek group guide to genomics papers

472

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SVG based genome viewer written in javascript using D3

JavaScript33gpl-2.0

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Python interface to access reference genome features (such as genes, transcripts

Python383apache-2.0

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Python wrapper -- and more -- for BEDTools (bioinformatics tools for "genome ari

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Nextflow98gpl-3.0

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C++660

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Nextflow417mit

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Rails frontend to The Genome Institute's drug gene interaction database.

Ruby95mit

2 years ago

A set of tools written in Perl and C++ for working with VCF files, such as those

C++505lgpl-3.0

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ADAM is a genomics analysis platform with specialized file formats built using A

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sort genomic data

Go35mit

5 years ago

A modern compressor for genomic files (FASTQ, SAM/BAM/CRAM, VCF, FASTA, GFF/GTF/

C159other

2 months ago

23andmebambgzip

HTML5 canvas genomic graphics library

JavaScript76

6 years ago

Cloud-native genomic dataframes and batch computing

Python984mit

14 hours ago

bioinformaticsgeneticsgenomics

GRIDSS: the Genomic Rearrangement IDentification Software Suite

Java258other

11 months ago

Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for ge

Java647mit

7 days ago

bedtools - the swiss army knife for genome arithmetic

C941mit

5 months ago

python access to UCSC genomes database

Python135mit

4 years ago

Interactive web-based genome browser.

JavaScript227bsd-2-clause

5 years ago

Informatics for RNA-seq: A web resource for analysis on the cloud. Educational t

R1339other

2 years ago

Flexible circular visualization of genome-associated data with BioPerl and SVG.

Perl47other

5 years ago

The Leek group guide to genomics papers

472

6 years ago

SVG based genome viewer written in javascript using D3

JavaScript33gpl-2.0

9 years ago

Python interface to access reference genome features (such as genes, transcripts

Python383apache-2.0

6 months ago

Rapid & standardized annotation of bacterial genomes, MAGs & plasmids

Python452gpl-3.0

18 days ago

annotationbacteriabacterial-genomes

:zap: :aquarius: Rapid prokaryotic genome annotation

Perl849

8 months ago

bacterial-genomesfunctional-assignmentgene-finding

A powerful toolset for genome arithmetic.

C++140gpl-2.0

4 years ago

Python wrapper -- and more -- for BEDTools (bioinformatics tools for "genome ari

Python310other

28 days ago

Generic but comprehensive pipeline for prokaryotic genome annotation and interro

Nextflow98gpl-3.0

20 days ago

annotationantimicrobial-genes-annotationbarrnap

A single molecule sequence assembler for genomes large and small.

C++660

15 days ago

A flexible pipeline for complete analysis of bacterial genomes

Nextflow417mit

20 days ago

bacterial-genomesbiocondaconda

Rails frontend to The Genome Institute's drug gene interaction database.

Ruby95mit

2 years ago

A set of tools written in Perl and C++ for working with VCF files, such as those

C++505lgpl-3.0

last year

SPAdes Genome Assembler

C++763other

28 days ago

genome-assemblyilluminametagenome-assembly

ADAM is a genomics analysis platform with specialized file formats built using A

Scala1003apache-2.0

last month

avrobig-databioinformatics

Pysam is a Python package for reading, manipulating, and writing genomics data s

Cython786mit

last month

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JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For J

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bioinformaticsbiologygenome-annotation