cython + htslib == fast VCF and BCF processing

Cython363mit

5 months ago

bioinformaticscythongenomics

sort genomic data

Go35mit

4 years ago

fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing

Nim676mit

4 months ago

coveragedepthexome

structural variant calling and genotyping with existing tools, but, smoothly.

Go227apache-2.0

5 months ago

genomicslumpystructural-variation

fast sample-swap and relatedness checks on BAMs/CRAMs/VCFs/GVCFs... "like damn t

Nim255mit

10 months ago

bioinformaticscancer-genomicsgenomics

annotate a VCF with other VCFs/BEDs/tabixed files

Go356mit

12 months ago

annotationbioinformaticsgenomics